The Nasutum Enigma: Cracking the Code of Madagascar’s Hidden Species

30/10/2025

Introduction: A Taxonomic Cold Case Reopened

In the dense rainforests of Madagascar, where biodiversity whispers through the canopy, a long-standing mystery has lingered in the herpetological archives: the true identity of Calumma nasutum. Originally described over a century ago, this diminutive chameleon has eluded precise classification due to its cryptic morphology and the taxonomic ambiguity surrounding its relatives. The recent publication in Salamandra (Vol. 61, Issue 4, 2025) by Glaw et al. reopens this cold case with forensic precision, leveraging museomics, molecular phylogenetics, and morphological scrutiny to redefine C. nasutum and unveil two new species within the C. gallus complex.

Scene Reconstruction: The Museomics Approach

The backbone of this study is museomics—a technique that extracts genomic data from historical museum specimens. This method allows researchers to revisit type specimens and compare them with freshly collected individuals using next-generation sequencing (NGS). The authors sequenced mitochondrial loci (ND4 and 16S) from both historical and contemporary samples, aligning them with MAFFT and analyzing divergence using uncorrected p-distances. This molecular lens revealed genetic distances ranging from 7.7% to 14.0% between clades, far exceeding the 3% threshold commonly used to delineate candidate species in Malagasy herpetofauna.

The inclusion of sequences from C. cf. gallus collected in Betampona showed divergence values of 3.0% and 3.6% from other clades, suggesting cryptic speciation. These findings were cross-referenced with GenBank data and barcoding efforts from previous studies (e.g., Vieites et al. 2009), reinforcing the genetic distinctiveness of these lineages.

Morphological Fingerprints: Decoding the Physical Evidence

While molecular data provided the genetic skeleton, morphological analysis fleshed out the profile. The study meticulously examined rostral appendages, parietal crests, scalation, and coloration patterns across specimens. Males of C. gallus were characterized by a long, straight rostral appendage, while females lacked this feature entirely—a clear case of sexual dimorphism. The holotype of C. gallus, housed at BMNH and described by Günther in 1877, was revisited and photographed in dorsal, ventral, and lateral views. Despite its degraded condition, key traits were still discernible.

The authors also compared ornamentation and body size across species, noting that traits like rostral appendages may serve as intimidation tools in male-male combat, as seen in Furcifer labordi and F. antimena. These observations support the hypothesis that sexual selection plays a role in morphological divergence, further complicating species identification when only one sex is available for study.

Geographic Profiling: Mapping the Distribution

The map of this investigation spans Madagascar's eastern rainforests, with sampling localities plotted in Figure 3. Specimens were collected from Betampona, Sahafina, and other regions, with GPS coordinates and elevations meticulously recorded. This spatial data was crucial for understanding species boundaries and ecological niches.

Interestingly, the study highlights the rarity and fragmentation of endemic species in Madagascar. Habitat specialization, limited dispersal, and anthropogenic pressures contribute to the micro-endemism observed in Calumma species. These factors not only complicate taxonomy but also elevate conservation urgency.

Chain of Custody: Specimen Handling and DNA Integrity

The "Materials and Methods" section reads like a procedural manual from a forensic lab. Specimens were euthanized ethically, fixed in ethanol, and stored in museum collections. DNA was extracted using protocols optimized for degraded samples, and PCR amplification was performed with specific primers under controlled thermocycler conditions. Sequencing was outsourced to Biosearch Technologies and LGC Genomics, ensuring high-quality reads for alignment and analysis.

The use of CodonCode Aligner for sequence trimming and BLAST for verification ensured data integrity. This rigorous chain of custody—from field to lab to database—underscores the reliability of the genetic evidence presented.

Suspect Lineup: The New Species Revealed

The climax of this narrative is the formal description of two new species: Calumma gehringi sp. n. and another unnamed species pending further analysis. C. gehringi is distinguished by its unique rostral morphology, genetic divergence, and restricted geographic range. The diagnosis includes detailed measurements, coloration, and scalation, supported by illustrations and photographs.

These new species were not just genetically distinct but also morphologically coherent, passing both molecular and phenotypic thresholds for species delimitation. Their discovery reshapes the C. nasutum complex, which now emerges as a polyphyletic group requiring taxonomic revision.

Motive and Means: Why the Confusion Persisted

The review wouldn't be complete without examining the motive behind the historical misclassification. The original descriptions of C. nasutum and C. gallus were based on limited specimens with vague locality data ("Madagascar"), making it difficult to anchor species concepts. Morphological conservatism among small chameleons further muddled identification, as did the lack of molecular tools in earlier decades.

The advent of museomics and integrative taxonomy provided the means to resolve these ambiguities. By combining historical specimens with modern sequencing and fieldwork, the authors reconstructed a more accurate phylogenetic tree and clarified species boundaries.

Conservation Verdict: Red List Implications

The implications extend beyond taxonomy into conservation. The study proposes IUCN Red List assessments for the newly described species, citing habitat fragmentation, limited range, and human threats. C. gehringi, for example, may qualify as Endangered due to its restricted distribution and ecological specialization.

This taxonomic clarity is essential for conservation planning. Misidentified species may be overlooked in policy decisions, while cryptic diversity can mask true extinction risks. By refining species definitions, the study enhances the precision of biodiversity assessments and conservation strategies.

Conclusion: Justice for the Forgotten Lizards

In the courtroom of science, this study delivers a compelling verdict: Calumma nasutum is not a single species but a complex of genetically and morphologically distinct lineages. Through rigor, the authors have exhumed the truth buried in museum drawers and rainforest leaf litter, giving voice to species long misclassified or ignored.

Their integrative approach—melding museomics, morphology, and molecular data—sets a benchmark for future taxonomic investigations. It reminds us that biodiversity is not just about counting species but understanding their histories, relationships, and roles in the ecosystem.

As Madagascar's forests continue to shrink, such reviews become not just academic exercises but acts of ecological justice. The scales of truth have tipped, and the verdict is clear: taxonomy matters, and every species deserves its name.

Author: Petr Nečas
My projects:   ARCHAIUS   │   CHAMELEONS.INFO